Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920850.1_cds_XP_016469918.1_62417
CDS Infomation

[gene=LOC107792238] [db_xref=GeneID:107792238] [protein=putative GPI-anchored protein PB15E9.01c] [protein_id=XP_016469918.1] [location=complement(join(60018..60031,60112..60171,60262..60368,60468..61155,61244..61444,62476..62746,63307..63495))] [gbkey=CDS]
Sequence

ATGCAGAAACAGAAAATGGGGAAACAAAGCAAATCGCGAAAAACCGAAAACGTTGGCAAA
GGAAAGGTTACTCCTGTACAAATCGCTTTCATCGTCGACCGCTACCTCTCTGATAACCGT
TTCACTGAAACCCGATCCACTTTTCGATCCGAAGCTTCCCATCTTCTCGCTAAGTCTCCC
ATTAATGAGGCGCCAAGGAGTTTATTGAGTTTAGGAGATATGTTGGATGAGTACATAAGT
TTGAAAGAGCAGAAAGTGTTTTTGGATCAAGAGAAGTGCAGATTGGATCATGAAAAAACA
CGGGTTCAGAATTTACTAAGTGGGATGCAACATGTTATGAATGCTTACAATGCTAGTACA
AATCTGATGCCGCCTTCCTCAATTGCTGCTGCTGCTTCTTCAATGCCCAAAATAGGTGCT
TTGCCAAGCATAGTTAATGGGTCTTCCCCAGTAACCACAGGTTATTATTCTACATACAAA
ACTGCAGCACTGATGTCAGCATCAATGCCTTCAAATGCTGCTCCAGATACCATGAAATTC
TCTACTCCAAATTCAATTCCATCAACCTCAAAAAGAAAAGGCATCAAAGACGTCTCTGCA
GCTCCCATAACTGCCAAGAGATCTCGTAAACACTTGATCACCAACCAGTTGTCACTTAAA
GATCCTAGTACAGATGCACAACCAACCGGTGTTCATAAACACAACAACAATGTGAATAGT
TCTGCAGTTCAATTATCAGATCCTGCGACCGCATCTGATAAGACACCAGTTCAAGGATCT
AATGTTGCCAAGTCTTTGTTCAATCAGCCCATTCAGTCCCCTCCAACTAATTCTTCTGGC
CCTAAAACACCACCAAGAGCATCTTCATCCCAAACTGACAAATCTATCTCTCCACTGGAA
GTTTGTTCAACTGCTACTTCCAGCAAAAATGTTACACCATCTCGTGTAACAGCCACAAAC
TGCACAATCATCTCGTCAGAAACAATTCGAATGACCCCTACCAAGCAAATAATTTACTCC
ATTGAAAGAAATCACTGCATTTCAACATCCTCACCAGTAAAGACCAACCTGAAGAGGCCT
ATTAAGCGAGATCAAGTAAAAAGTAGGTTGGACTTTGATACCTCTGATAACATCCCATGT
AATTCAGAAATGGCATCTGGCTCTGACATGATTTCTACTTCTGATTCTGAGAAAGAAGGA
GATATTTTTGACTTAGATTTGCCTAATTTAGATGCTTTAGGGGTGGATTTTAATCTGTCT
GAACTACTAGTTGATTTTGACCTTGATGGAGAGGGGATTGATTATTCTTGCCAGCAAACA
TTAGATTCTTCCCCAGATACTTTTTCAGGGTCACCTCATGAGTCAGGAAATGTCAATGCT
GATACAAACCAGATGACCTCTCAGATTTCATCTACAGTTACTGAAGTCTTTTCAGAGCAA
GACATGAATTTACTAGGTTCAGACTCCATGACCACTATGAAATCAGTTACCAAATGCATC
AAAATTTTAAGTCCTGTTAAAAATATCTGA

Peptide Sequence

PEP ID

XP_016469918.1
PEP Infomation

PREDICTED: putative GPI-anchored protein PB15E9.01c [Nicotiana tabacum]
Sequence

MQKQKMGKQSKSRKTENVGKGKVTPVQIAFIVDRYLSDNRFTETRSTFRSEASHLLAKSP
INEAPRSLLSLGDMLDEYISLKEQKVFLDQEKCRLDHEKTRVQNLLSGMQHVMNAYNAST
NLMPPSSIAAAASSMPKIGALPSIVNGSSPVTTGYYSTYKTAALMSASMPSNAAPDTMKF
STPNSIPSTSKRKGIKDVSAAPITAKRSRKHLITNQLSLKDPSTDAQPTGVHKHNNNVNS
SAVQLSDPATASDKTPVQGSNVAKSLFNQPIQSPPTNSSGPKTPPRASSSQTDKSISPLE
VCSTATSSKNVTPSRVTATNCTIISSETIRMTPTKQIIYSIERNHCISTSSPVKTNLKRP
IKRDQVKSRLDFDTSDNIPCNSEMASGSDMISTSDSEKEGDIFDLDLPNLDALGVDFNLS
ELLVDFDLDGEGIDYSCQQTLDSSPDTFSGSPHESGNVNADTNQMTSQISSTVTEVFSEQ
DMNLLGSDSMTTMKSVTKCIKILSPVKNI

Transcript Sequence

Gene sequence data has not been registered.